Anchorpoints

Gene id
AT1G67090
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G38410Ribulose bisphosphate carboxylase (small chain) family protein Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity. Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G40120No description available.scaffold_7+View
AL2G14910No description available.scaffold_2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G18170No description available.A02-View
BR02G00210No description available.A02-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G07150No description available.Bvchr2.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G23750No description available.Chr5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00282G00140No description available.supercontig_282-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G36250No description available.scaffold_7+View
CRU_002G12580No description available.scaffold_2-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G13170No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G06340No description available.Gm19+View
GM18G53430No description available.Gm18-View
GM13G07610Ribulose bisphosphate carboxylase small chain 1, chloroplasticGm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G20180No description available.Chr01+View
GR07G18130No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G040990No description available.chr1-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G023770No description available.9+View
MD16G001630No description available.16-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G018300ribulose bisphosphate carboxylase small chainchr6+View
MT7G007120ribulose bisphosphate carboxylase small chainchr7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G10000No description available.Chr04-View
PT17G11460No description available.Chr17+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G085950Ribulose bisphosphate carboxylase small chain (AHRD V1 ***- A9YTZ7_SOLTU)%3B contains Interpro domain(s) IPR000894 Ribulose bisphosphate carboxylase%2C small chain Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic Ribulose bisphosphate carboxylase small chain 3B, chloroplasticch02+View
SL02G063150Ribulose bisphosphate carboxylase small chain 1, chloroplastic Ribulose bisphosphate carboxylase small chain (AHRD V1 ***- Q84QE5_TOBAC)%3B contains Interpro domain(s) IPR000894 Ribulose bisphosphate carboxylase%2C small chainch02+View
SL03G034220Ribulose bisphosphate carboxylase small chain (AHRD V1 ***- A9YTZ7_SOLTU)%3B contains Interpro domain(s) IPR000894 Ribulose bisphosphate carboxylase%2C small chain Ribulose bisphosphate carboxylase small chain 2A, chloroplasticch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G009830Ribulose bisphosphate carboxylase small chain (AHRD V1 ***- A9YTZ7_SOLTU); contains Interpro domain(s) IPR000894 Ribulose bisphosphate carboxylase, small chainchr03+View
ST02G029110Ribulose bisphosphate carboxylase small chain (AHRD V1 ***- A9YTZ7_SOLTU); contains Interpro domain(s) IPR000894 Ribulose bisphosphate carboxylase, small chain Ribulose bisphosphate carboxylase small chain 2A, chloroplastic Ribulose bisphosphate carboxylase small chain 2C, chloroplasticchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G14060No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G22020similar to AT1G67090|RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)ch5-6-View


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Gene id
Species
Description
Chromosome
Strand