Anchorpoints
- Gene id
- AT1G23760
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G70370 | polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1); Has 2933 Blast hits to 2085 proteins in 370 species: Archae - 9; Bacteria - 765; Metazoa - 357; Fungi - 320; Plants - 613; Viruses - 5; Other Eukaryotes - 864 (source: NCBI BLink). polygalacturonase 2 | 1 | - | View |
AT1G60390 | polygalacturonase 1 polygalacturonase 1 (PG1); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 3094 Blast hits to 2364 proteins in 384 species: Archae - 8; Bacteria - 697; Metazoa - 473; Fungi - 328; Plants - 614; Viruses - 4; Other Eukaryotes - 970 (source: NCBI BLink). | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G18810 | No description available. | scaffold_2 | - | View |
AL1G25570 | No description available. | scaffold_1 | + | View |
AL2G05770 | No description available. | scaffold_2 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00058G01590 | No description available. | scaffold00058 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G26940 | No description available. | A07 | - | View |
BR09G14750 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G09860 | No description available. | Bvchr6.sca027 | + | View |
BV5G02790 | No description available. | Bvchr5.sca023 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL00G05370 | No description available. | Chr0 | - | View |
CL06G17500 | No description available. | Chr6 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00030G00200 | No description available. | CM3.5_scaffold00030 | + | View |
CM00014G00030 | No description available. | CM3.5_scaffold00014 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00124G00380 | No description available. | supercontig_124 | - | View |
CP00069G00320 | No description available. | supercontig_69 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G04660 | No description available. | scaffold_2 | + | View |
CRU_001G22340 | No description available. | scaffold_1 | + | View |
CRU_002G16120 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00003G02600 | No description available. | scaffold00003 | + | View |
CS00020G01540 | No description available. | scaffold00020 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G21070 | No description available. | scaffold_8 | + | View |
EG0002G27510 | No description available. | scaffold_2 | + | View |
EG0002G03100 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G21740 | Probable polygalacturonase non-catalytic subunit JP650, Precursor (putative) | LG4 | - | View |
FV5G06060 | Probable polygalacturonase non-catalytic subunit JP650, Precursor (putative) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM06G19480 | No description available. | Gm06 | + | View |
GM01G03760 | No description available. | Gm01 | + | View |
GM02G03960 | No description available. | Gm02 | - | View |
GM18G18980 | No description available. | Gm18 | - | View |
GM08G39700 | No description available. | Gm08 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G16140 | No description available. | Chr02 | + | View |
GR05G18260 | No description available. | Chr05 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G005750 | No description available. | chr1 | + | View |
LJ2G024320 | No description available. | chr2 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G014390 | No description available. | 6 | + | View |
MD16G005110 | No description available. | 16 | - | View |
MD13G006530 | No description available. | 13 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04083G00170 | No description available. | scaffold04083 | - | View |
ME09880G00010 | No description available. | scaffold09880 | + | View |
ME06715G00390 | No description available. | scaffold06715 | - | View |
ME05378G00080 | No description available. | scaffold05378 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G064500 | polygalacturonase non-catalytic protein | chr8 | - | View |
MT3G078090 | polygalacturonase non-catalytic protein | chr3 | + | View |
MT5G034320 | polygalacturonase non-catalytic protein | chr5 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS08G29200 | BURP domain containing protein, expressed BURP domain-containing protein 12 | 8 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G26460 | No description available. | scaffold_1 | + | View |
PPE_005G18100 | No description available. | scaffold_5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G04080 | No description available. | Chr10 | - | View |
PT12G07920 | No description available. | Chr12 | + | View |
PT08G19000 | No description available. | Chr08 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29631G00400 | No description available. | 29631 | + | View |
RC30147G06400 | No description available. | 30147 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G114240 | BURP domain-containing protein (Fragment) (AHRD V1 *--- C1PI55_ARATH)%3B contains Interpro domain(s) IPR004873 BURP | ch03 | - | View |
SL05G005540 | Polygalacturonase non-catalytic subunit AroGP3 BURP domain-containing protein (Fragment) (AHRD V1 *--- C1PI44_ARATH)%3B contains Interpro domain(s) IPR004873 BURP | ch05 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST05G013170 | BURP domain-containing protein (Fragment) (AHRD V1 *--- Q94IC5_9ROSI); contains Interpro domain(s) IPR004873 BURP | chr05 | - | View |
ST03G027640 | BURP domain-containing protein (Fragment) (AHRD V1 *--- C1PI55_ARATH); contains Interpro domain(s) IPR004873 BURP | chr03 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G24970 | No description available. | scaffold_2 | - | View |
TC0003G00970 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G04420 | similar to AT1G60390|BURP domain-containing protein / polygalacturonase, putative | ch2-2 | + | View |
TP5G25480 | similar to AT1G70370|BURP domain-containing protein / polygalacturonase, putative | ch5-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G01920 | name=GSVIVG01007771001; | chr17 | - | View |