Anchorpoints

Gene id
AT1G23760
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G70370polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1); Has 2933 Blast hits to 2085 proteins in 370 species: Archae - 9; Bacteria - 765; Metazoa - 357; Fungi - 320; Plants - 613; Viruses - 5; Other Eukaryotes - 864 (source: NCBI BLink). polygalacturonase 21-View
AT1G60390polygalacturonase 1 polygalacturonase 1 (PG1); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 3094 Blast hits to 2364 proteins in 384 species: Archae - 8; Bacteria - 697; Metazoa - 473; Fungi - 328; Plants - 614; Viruses - 4; Other Eukaryotes - 970 (source: NCBI BLink).1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G18810No description available.scaffold_2-View
AL1G25570No description available.scaffold_1+View
AL2G05770No description available.scaffold_2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00058G01590No description available.scaffold00058+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G26940No description available.A07-View
BR09G14750No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G09860No description available.Bvchr6.sca027+View
BV5G02790No description available.Bvchr5.sca023-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL00G05370No description available.Chr0-View
CL06G17500No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G00200No description available.CM3.5_scaffold00030+View
CM00014G00030No description available.CM3.5_scaffold00014-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00124G00380No description available.supercontig_124-View
CP00069G00320No description available.supercontig_69-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G04660No description available.scaffold_2+View
CRU_001G22340No description available.scaffold_1+View
CRU_002G16120No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G02600No description available.scaffold00003+View
CS00020G01540No description available.scaffold00020+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G21070No description available.scaffold_8+View
EG0002G27510No description available.scaffold_2+View
EG0002G03100No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G21740Probable polygalacturonase non-catalytic subunit JP650, Precursor (putative)LG4-View
FV5G06060Probable polygalacturonase non-catalytic subunit JP650, Precursor (putative)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G19480No description available.Gm06+View
GM01G03760No description available.Gm01+View
GM02G03960No description available.Gm02-View
GM18G18980No description available.Gm18-View
GM08G39700No description available.Gm08+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G16140No description available.Chr02+View
GR05G18260No description available.Chr05+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G005750No description available.chr1+View
LJ2G024320No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G014390No description available.6+View
MD16G005110No description available.16-View
MD13G006530No description available.13-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04083G00170No description available.scaffold04083-View
ME09880G00010No description available.scaffold09880+View
ME06715G00390No description available.scaffold06715-View
ME05378G00080No description available.scaffold05378+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G064500polygalacturonase non-catalytic proteinchr8-View
MT3G078090polygalacturonase non-catalytic proteinchr3+View
MT5G034320polygalacturonase non-catalytic proteinchr5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G29200BURP domain containing protein, expressed BURP domain-containing protein 128+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G26460No description available.scaffold_1+View
PPE_005G18100No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G04080No description available.Chr10-View
PT12G07920No description available.Chr12+View
PT08G19000No description available.Chr08+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29631G00400No description available.29631+View
RC30147G06400No description available.30147-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G114240BURP domain-containing protein (Fragment) (AHRD V1 *--- C1PI55_ARATH)%3B contains Interpro domain(s) IPR004873 BURPch03-View
SL05G005540Polygalacturonase non-catalytic subunit AroGP3 BURP domain-containing protein (Fragment) (AHRD V1 *--- C1PI44_ARATH)%3B contains Interpro domain(s) IPR004873 BURPch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G013170BURP domain-containing protein (Fragment) (AHRD V1 *--- Q94IC5_9ROSI); contains Interpro domain(s) IPR004873 BURPchr05-View
ST03G027640BURP domain-containing protein (Fragment) (AHRD V1 *--- C1PI55_ARATH); contains Interpro domain(s) IPR004873 BURPchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G24970No description available.scaffold_2-View
TC0003G00970No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G04420similar to AT1G60390|BURP domain-containing protein / polygalacturonase, putativech2-2+View
TP5G25480similar to AT1G70370|BURP domain-containing protein / polygalacturonase, putativech5-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G01920name=GSVIVG01007771001;chr17-View


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Gene id
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Description
Chromosome
Strand