Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G12910
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G26640 | Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 (LWD2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G12910.1); Has 5639 Blast hits to 5196 proteins in 384 species: Archae - 6; Bacteria - 320; Metazoa - 2319; Fungi - 1389; Plants - 885; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). Encodes LIGHT-REGULATED WD1 (LWD1), a clock proteins regulating circadian period length and photoperiodic flowering. | 3 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL5G05310 | No description available. | scaffold_5 | + | View |
| AL1G13540 | No description available. | scaffold_1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR06G08170 | No description available. | A06 | + | View |
| BR09G49400 | No description available. | A09 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00023G00130 | No description available. | CM3.5_scaffold00023 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_005G04240 | No description available. | scaffold_5 | + | View |
| CRU_001G12070 | No description available. | scaffold_1 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0009G12900 | No description available. | scaffold_9 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV6G52050 | WD repeat-containing protein LWD1 (AtAN11-A) (similar to) | LG6 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM19G28250 | No description available. | Gm19 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD09G000180 | No description available. | 9 | + | View |
| MD17G000020 | No description available. | 17 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT7G084810 | transducin/WD-like repeat-protein | chr7 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_003G29230 | No description available. | scaffold_3 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0004G05260 | No description available. | scaffold_4 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G15760 | similar to AT3G26640|LWD2 (LIGHT-REGULATED WD 2) | ch2-4 | + | View |
| TP1G11480 | similar to AT1G12910|ATAN11 (ANTHOCYANIN11) | ch1-1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV14G13280 | name=GSVIVG01032940001; | chr14 | + | View |