Anchorpoints

Gene id
AT1G07770
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G46040ribosomal protein S15A D ribosomal protein S15A D (RPS15AD); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 3503 Blast hits to 3503 proteins in 1362 species: Archae - 277; Bacteria - 1878; Metazoa - 431; Fungi - 223; Plants - 255; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). Regulated by TCP20.3+View
AT5G59850Ribosomal protein S8 family protein Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G26040No description available.scaffold_8-View
AL1G07390No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G11930No description available.A02+View
BR09G51960No description available.A09-View
BR06G04600No description available.A06+View
BR08G30080No description available.A08-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G01940No description available.Chr3-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00190G00250No description available.supercontig_190+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G06750No description available.scaffold_1-View
CRU_005G11190No description available.scaffold_5+View
CRU_004G20950No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G00890No description available.scaffold00014+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G2725040S ribosomal protein S15a-1 (similar to)LG7-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G10820No description available.Chr01-View
GR13G26500No description available.Chr13+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G22200No description available.scaffold_2+View
PPE_006G08210No description available.scaffold_6+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G32150No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G15560similar to AT3G46040|RPS15AD (ribosomal protein S15A D)ch5-1-View
TP6G21540similar to AT5G59850|40S ribosomal protein S15A (RPS15aF)ch6-6-View
TP1G06420similar to AT1G07770|RPS15A (ribosomal protein s15a)ch1-1+View


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Gene id
Species
Description
Chromosome
Strand