Anchorpoints
- Gene id
- AT1G07770
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G46040 | ribosomal protein S15A D ribosomal protein S15A D (RPS15AD); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 3503 Blast hits to 3503 proteins in 1362 species: Archae - 277; Bacteria - 1878; Metazoa - 431; Fungi - 223; Plants - 255; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). Regulated by TCP20. | 3 | + | View |
AT5G59850 | Ribosomal protein S8 family protein Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G26040 | No description available. | scaffold_8 | - | View |
AL1G07390 | No description available. | scaffold_1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G11930 | No description available. | A02 | + | View |
BR09G51960 | No description available. | A09 | - | View |
BR06G04600 | No description available. | A06 | + | View |
BR08G30080 | No description available. | A08 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL03G01940 | No description available. | Chr3 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00190G00250 | No description available. | supercontig_190 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G06750 | No description available. | scaffold_1 | - | View |
CRU_005G11190 | No description available. | scaffold_5 | + | View |
CRU_004G20950 | No description available. | scaffold_4 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00014G00890 | No description available. | scaffold00014 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G27250 | 40S ribosomal protein S15a-1 (similar to) | LG7 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR01G10820 | No description available. | Chr01 | - | View |
GR13G26500 | No description available. | Chr13 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G22200 | No description available. | scaffold_2 | + | View |
PPE_006G08210 | No description available. | scaffold_6 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G32150 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G15560 | similar to AT3G46040|RPS15AD (ribosomal protein S15A D) | ch5-1 | - | View |
TP6G21540 | similar to AT5G59850|40S ribosomal protein S15A (RPS15aF) | ch6-6 | - | View |
TP1G06420 | similar to AT1G07770|RPS15A (ribosomal protein s15a) | ch1-1 | + | View |