Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G03040
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G02590 | unfertilized embryo sac 12 (UNE12); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G03040.1); Has 2959 Blast hits to 2953 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 7; Plants - 2922; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G02320 | No description available. | scaffold_1 | - | View |
| AL6G38780 | No description available. | scaffold_6 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR09G00310 | No description available. | A09 | + | View |
| BR03G27190 | No description available. | A03 | + | View |
| BR05G15530 | No description available. | A05 | + | View |
| BR10G05090 | No description available. | A10 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL09G07020 | No description available. | Chr9 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00117G01000 | No description available. | supercontig_117 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_006G33340 | No description available. | scaffold_6 | + | View |
| CRU_001G02010 | No description available. | scaffold_1 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00022G00520 | No description available. | scaffold00022 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0002G12250 | No description available. | scaffold_2 | + | View |
| EG0008G35070 | No description available. | scaffold_8 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G25530 | Transcription factor UNE12 (bHLH 59) (similar to) | scf0513168 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM19G34360 | No description available. | Gm19 | + | View |
| GM10G30430 | No description available. | Gm10 | + | View |
| GM02G16110 | No description available. | Gm02 | - | View |
| GM10G03690 | No description available. | Gm10 | + | View |
| GM03G31510 | No description available. | Gm03 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR01G24250 | No description available. | Chr01 | + | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ5G019310 | No description available. | chr5 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03614G03420 | No description available. | scaffold03614 | - | View |
| ME03802G00660 | No description available. | scaffold03802 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G070870 | basic helix loop helix protein BHLH4 | chr1 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_008G24650 | No description available. | scaffold_8 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G065820 | BHLH transcription factor (AHRD V1 *-** B6U846_MAIZE)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch09 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST09G020640 | BHLH transcription factor (AHRD V1 *-** B6U846_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | chr09 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0005G28210 | No description available. | scaffold_5 | - | View |
| TC0001G26610 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G02030 | similar to AT1G03040|basic helix-loop-helix (bHLH) family protein | ch1-1 | - | View |
| TP6G02500 | similar to AT4G02590|UNE12 (unfertilized embryo sac 12) | ch6-1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV14G03060 | name=GSVIVG01021787001; | chr14 | + | View |