Functional clusters
Information
- Type
- Mapman term
- Identifier
- 29.2.2.3.2
- Description
- protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNAs
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 2 | 17 | CH_ath_270 | 6 | 51 | 0.0000308212 |
Arabidopsis thaliana | 2 | 17 | CH_ath_187 | 4 | 4 | 0.00000051521 |
Arabidopsis thaliana | 2 | 17 | CH_ath_351 | 3 | 3 | 0.000266324 |
Arabidopsis thaliana | 3 | 17 | CH_ath_350 | 3 | 3 | 0.000266324 |
Arabidopsis thaliana | 3 | 17 | CH_ath_349 | 3 | 3 | 0.000266324 |
Arabidopsis thaliana | 4 | 17 | CH_ath_188 | 4 | 4 | 0.00000051521 |
Arabidopsis thaliana | 2 | 19 | CH_ath_70 | 6 | 51 | 0.0000308212 |
Arabidopsis thaliana | 2 | 19 | CH_ath_59 | 4 | 4 | 0.00000051521 |
Arabidopsis thaliana | 2 | 19 | CH_ath_83 | 3 | 3 | 0.000266324 |
Arabidopsis thaliana | 3 | 19 | CH_ath_81 | 3 | 3 | 0.000266324 |
Arabidopsis thaliana | 3 | 19 | CH_ath_82 | 3 | 3 | 0.000266324 |
Arabidopsis thaliana | 4 | 19 | CH_ath_60 | 4 | 4 | 0.00000051521 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |