Functional clusters
Information
- Type
- GO term
- Identifier
- GO:1901566
- Description
- organonitrogen compound biosynthetic process
Cluster overview
No results found
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0000162 | tryptophan biosynthetic process | 1 |
GO:0006164 | purine nucleotide biosynthetic process | 1 |
GO:0006169 | adenosine salvage | 4 |
GO:0006177 | GMP biosynthetic process | 2 |
GO:0006182 | cGMP biosynthetic process | 27 |
GO:0006183 | GTP biosynthetic process | 11 |
GO:0006231 | dTMP biosynthetic process | 7 |
GO:0006233 | dTDP biosynthetic process | 3 |
GO:0006529 | asparagine biosynthetic process | 4 |
GO:0006535 | cysteine biosynthetic process from serine | 12 |
GO:0006542 | glutamine biosynthetic process | 8 |
GO:0006556 | S-adenosylmethionine biosynthetic process | 3 |
GO:0006557 | S-adenosylmethioninamine biosynthetic process | 3 |
GO:0006571 | tyrosine biosynthetic process | 9 |
GO:0006596 | polyamine biosynthetic process | 8 |
GO:0006597 | spermine biosynthetic process | 10 |
GO:0006656 | phosphatidylcholine biosynthetic process | 4 |
GO:0006741 | NADP biosynthetic process | 20 |
GO:0006784 | heme a biosynthetic process | 3 |
GO:0008612 | peptidyl-lysine modification to hypusine | 3 |
GO:0008615 | pyridoxine biosynthetic process | 1 |
GO:0008616 | queuosine biosynthetic process | 8 |
GO:0008652 | cellular amino acid biosynthetic process | 5 |
GO:0009067 | aspartate family amino acid biosynthetic process | 1 |
GO:0009098 | leucine biosynthetic process | 1 |
GO:0009236 | cobalamin biosynthetic process | 5 |
GO:0009252 | peptidoglycan biosynthetic process | 5 |
GO:0009435 | NAD biosynthetic process | 1 |
GO:0009446 | putrescine biosynthetic process | 1 |
GO:0009759 | indole glucosinolate biosynthetic process | 55 |
GO:0009821 | alkaloid biosynthetic process | 6 |
GO:0010024 | phytochromobilin biosynthetic process | 2 |
GO:0015986 | ATP synthesis coupled proton transport | 7 |
GO:0019281 | L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine | 1 |
GO:0019354 | siroheme biosynthetic process | 1 |
GO:0019358 | nicotinate nucleotide salvage | 2 |
GO:0019428 | allantoin biosynthetic process | 2 |
GO:0019509 | L-methionine salvage from methylthioadenosine | 14 |
GO:0030418 | nicotianamine biosynthetic process | 11 |
GO:0033387 | putrescine biosynthetic process from ornithine | 8 |
GO:0033388 | putrescine biosynthetic process from arginine | 2 |
GO:0033466 | trans-zeatin biosynthetic process | 4 |
GO:0036172 | thiamine salvage | 2 |
GO:0042318 | penicillin biosynthetic process | 2 |
GO:0042450 | arginine biosynthetic process via ornithine | 1 |
GO:0044205 | 'de novo' UMP biosynthetic process | 8 |
GO:0046084 | adenine biosynthetic process | 1 |
GO:0046901 | tetrahydrofolylpolyglutamate biosynthetic process | 4 |
GO:0046938 | phytochelatin biosynthetic process | 22 |
GO:0048034 | heme O biosynthetic process | 5 |
GO:0071266 | 'de novo' L-methionine biosynthetic process | 9 |
GO:0080028 | nitrile biosynthetic process | 33 |
GO:1901183 | positive regulation of camalexin biosynthetic process | 2 |
GO:1901607 | alpha-amino acid biosynthetic process | 11 |
GO:1901695 | tyramine biosynthetic process | 3 |
GO:2001295 | malonyl-CoA biosynthetic process | 3 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |