Functional clusters: Medicago truncatula
Tool for the visualization of the physical clustering of functionally related genes.
Chromosomal overview
Options
Data Overview
Experiments Overview
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal | Cluster count |
---|---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X | 586 |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X | 715 |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X | 898 |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X | 201 |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X | 228 |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X | 281 |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V | 9 |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V | 14 |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V | 38 |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V | 8 |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V | 18 |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V | 21 |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X | 1244 |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X | 189 |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V | 25 |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V | 2 |