View conserved binding sites


Gene
VV05G11150
Description
name=GSVIVG01034938001;
Alias
GSVIVG01034938001;GSVIVT01034938001;GSVIVG01034938001
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-735
Upstream-808
Matrix_109GBF3Not availableUpstream-565
Upstream-737
Upstream-808
Matrix_113ABI5Not availableUpstream-737
Upstream-808
Upstream-810
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-562
Upstream-563
Upstream-732
Upstream-733
Upstream-765
Upstream-805
Matrix_120BEE2Not availableUpstream-566
Upstream-736
Matrix_122ABF1;AREB2Not availableUpstream-736
Upstream-809
Matrix_129ABF1Not availableUpstream-566
Upstream-736
Upstream-809
Matrix_134ABF1Not availableUpstream-737
Upstream-809
Matrix_14ZCW32;AT5G62610Not availableUpstream-566
Upstream-737
Upstream-809
Matrix_145GBF4;AT5G44080Not availableUpstream-567
Upstream-737
Upstream-810
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-764
Upstream-805
Matrix_156POC1Not availableUpstream-565
Upstream-567
Upstream-735
Upstream-737
Upstream-808
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-566
Matrix_192FHY3/FAR1Not availableUpstream-737
Upstream-806
Upstream-810
Matrix_194HYH;HY5Not availableUpstream-733
Upstream-806
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-566
Upstream-736
Upstream-809
Matrix_214AP1Not availableUpstream-383
Upstream-807
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-737
Upstream-806
Matrix_233MYC3Not availableUpstream-567
Upstream-737
Matrix_24POC1Not availableUpstream-764
Matrix_247PIF3Not availableUpstream-566
Upstream-736
Upstream-768
Upstream-809
Matrix_264ATAREB1Not availableUpstream-736
Upstream-809
Matrix_296GBF2Not availableUpstream-566
Upstream-737
Matrix_300bZIP68;bZIP16Not availableUpstream-566
Upstream-737
Upstream-809
Upstream-810
Matrix_301PIL5Not availableUpstream-561
Upstream-737
Upstream-810
Matrix_331GBF1Not availableUpstream-737
Upstream-808
Matrix_332SPT;ALCNot availableUpstream-566
Upstream-567
Upstream-736
Upstream-737
Upstream-809
Matrix_338AP2Not availableUpstream-733
Upstream-806
Matrix_345POC1Not availableUpstream-562
Upstream-563
Upstream-732
Upstream-733
Upstream-764
Upstream-765
Upstream-805
Matrix_356PRR5Not availableUpstream-729
Upstream-802
Upstream-806
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-78
Matrix_389ILR3Not availableUpstream-736
Upstream-809
Matrix_403BZR1Not availableUpstream-766
Upstream-807
Matrix_42AT2G45680Not availableUpstream-773
Upstream-796
Matrix_443AGL15Not availableUpstream-734
Upstream-807
Matrix_488ABF1Not availableUpstream-558
Upstream-735
Upstream-760
Upstream-801
Matrix_516ANAC038;ANAC079Not availableUpstream-619
Matrix_53MYC3Not availableUpstream-564
Matrix_55PIF3Not availableUpstream-565
Upstream-735
Upstream-808
Matrix_7PIF4Not availableUpstream-566
Upstream-738
Upstream-809
Matrix_77PRR5Not availableUpstream-565
Upstream-734
Upstream-735
Upstream-808
Motif_174SREATMSDsugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in ArabidopsisUpstream-691
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-567
Upstream-737
Upstream-810
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-736
Upstream-808
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-566
Upstream-567
Upstream-736
Upstream-737
Upstream-809
Upstream-810
Upstream-1979
Motif_244ABRE-like binding site motifNot availableUpstream-737
Upstream-808
Upstream-810
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-737
Upstream-808
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-567
Upstream-737
Upstream-810
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-566
Upstream-567
Upstream-736
Upstream-737
Upstream-809
Motif_542ABI5;AtMYC2;HY5A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesisUpstream-808
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-738
Upstream-808
Upstream-811
Motif_638ABRE binding site motifNot availableUpstream-737
Upstream-808
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-811