View conserved binding sites


Gene
ST09G010820
Description
Monodehydroascorbate reductase (AHRD V1 ***- D2CGM8_IPOBA); contains Interpro domain(s) IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Alias
gene:Sotub09g010820;Sotub09g010820.1.1;Sotub09g010820;Sotub09g010820.1.1
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-177
Upstream-178
Matrix_109GBF3Not availableUpstream-179
Upstream-180
Matrix_113ABI5Not availableUpstream-177
Upstream-178
Upstream-179
Upstream-180
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-175
Upstream-176
Matrix_122ABF1;AREB2Not availableUpstream-177
Upstream-178
Matrix_129ABF1Not availableUpstream-178
Upstream-179
Matrix_134ABF1Not availableUpstream-179
Upstream-180
Matrix_145GBF4;AT5G44080Not availableUpstream-179
Upstream-180
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-175
Matrix_156POC1Not availableUpstream-179
Upstream-180
Matrix_192FHY3/FAR1Not availableUpstream-179
Upstream-180
Matrix_194HYH;HY5Not availableUpstream-176
Matrix_214AP1Not availableUpstream-177
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-179
Upstream-180
Matrix_228TGA2Not availableUpstream-795
Matrix_264ATAREB1Not availableUpstream-176
Upstream-178
Upstream-179
Matrix_300bZIP68;bZIP16Not availableUpstream-179
Upstream-180
Matrix_301PIL5Not availableUpstream-179
Upstream-180
Upstream-1670
Matrix_331GBF1Not availableUpstream-179
Upstream-180
Matrix_332SPT;ALCNot availableUpstream-179
Upstream-180
Matrix_338AP2Not availableUpstream-176
Matrix_345POC1Not availableUpstream-175
Upstream-176
Matrix_356PRR5Not availableUpstream-172
Upstream-176
Matrix_403BZR1Not availableUpstream-177
Matrix_419TGA9;PAN;TGA6;bZIP65Not availableUpstream-796
Matrix_438AtbZIP63Not availableUpstream-177
Matrix_443AGL15Not availableUpstream-177
Matrix_456bZIP60Not availableUpstream-224
Upstream-225
Matrix_47AtMYB77Not availableUpstream-226
Matrix_480BES1Not availableUpstream-178
Upstream-179
Matrix_488ABF1Not availableUpstream-177
Upstream-178
Matrix_53MYC3Not availableUpstream-180
Matrix_55PIF3Not availableUpstream-177
Upstream-178
Matrix_68AtMYB77More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84Upstream-226
Matrix_7PIF4Not availableUpstream-180
Upstream-181
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-186
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-180
Upstream-1670
Upstream-1866
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-219
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-180
Upstream-219
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-179
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-179
Upstream-180
Upstream-186
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-219
Motif_244ABRE-like binding site motifNot availableUpstream-178
Upstream-180
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemUpstream-179
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisUpstream-645
Upstream-901
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-180
Motif_33ACGTCBOXC-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding siteUpstream-796
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-219
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-180
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-180
Motif_453HEXMOTIFTAH3H4hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding siteUpstream-795
Upstream-797
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-181
Motif_567T/GBOXATPIN2T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motifUpstream-187
Motif_576TGACGTVMAMYTGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seedsUpstream-795
Upstream-797
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-181
Motif_630WBOXNTCHN48W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobaccoUpstream-210
Motif_638ABRE binding site motifNot availableUpstream-180
Motif_641LRENPCABELRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241Upstream-181
Motif_685PALINDROMICCBOXGMPalindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequenceUpstream-795
Motif_92ABREATRD22ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22Upstream-179