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WorkbenchView conserved binding sites
- Gene
- ST04G034390
- Description
- MADS box transcription factor (AHRD V1 ***- Q8L5F5_DAUCA); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box
- Alias
- gene:Sotub04g034390;Sotub04g034390.1.1;Sotub04g034390;Sotub04g034390.1.1
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Matrix_173 | ZAP1 | Not available | Upstream | -520 |
| Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | Upstream | -198 |
| Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -199 |