Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchView conserved binding sites
- Gene
- ST04G034200
- Description
- Ribosomal RNA small subunit methyltransferase I (AHRD V1 ***- C7QPU2_CYAP0); contains Interpro domain(s) IPR008189 Uncharacterised protein family UPF0011
- Alias
- gene:Sotub04g034200;Sotub04g034200.1.1;Sotub04g034200;Sotub04g034200.1.1
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Motif_235 | C8GCARGAT | Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15) | Upstream | -185 |
| Upstream | -330 | |||
| Upstream | -535 | |||
| Motif_502 | MYB98 | The MYB98 subcircuit of the synergid gene regulatory network includes genes directly and indirectly regulated by MYB98 | Upstream | -355 |