View conserved binding sites


Gene
ST04G015810
Description
DNA primase large subunit (AHRD V1 **** B5X2T9_SALSA); contains Interpro domain(s) IPR016558 DNA primase, large subunit, eukaryotic
Alias
gene:Sotub04g015810;Sotub04g015810.1.1;Sotub04g015810;Sotub04g015810.1.1
Binding siteNameDescriptionLocationPosition
Motif_183TRANSINITDICOTSContext sequence of translational initiation codon in dicotsUpstream-66
Motif_195TATABOX4TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationUpstream-825
Motif_226E2F1OSPCNAre2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissueUpstream-72
Motif_372E2FATE2F-binding site found in many potential E2F target genes; most potential E2F targets identified in silico show a cell cycle-regulated expressionUpstream-71
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-72
Upstream-1150
Upstream-1392
Motif_495TRANSINITMONOCOTSContext sequence of translational initiation codon in monocotsUpstream-66
Motif_663E2F binding site motif;E2F/DP BS in AtCDC6Not availableUpstream-72