View conserved binding sites


Gene
ST01G048690
Description
Armadillo/beta-catenin repeat family protein (AHRD V1 ***- D7MDH4_ARALY); contains Interpro domain(s) IPR011989 Armadillo-like helical
Alias
gene:Sotub01g048690;Sotub01g048690.1.1;Sotub01g048690;Sotub01g048690.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-178
Matrix_119RRTF1Not availableUpstream-177
Matrix_128TGA2Not availableUpstream-176
Matrix_138RRTF1Not availableUpstream-177
Matrix_147ERF3;AT1G80580Not availableUpstream-176
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-177
Matrix_165KNAT1Not availableUpstream-175
Matrix_166TGA4Not availableUpstream-176
Matrix_224ERF1Not availableUpstream-180
Matrix_256IXR11;KNAT5;KNAT4;KNAT3Not availableUpstream-176
Matrix_261ATERF-1Not availableUpstream-177
Matrix_287ERF2Not availableUpstream-178
Matrix_311TGA1Not availableUpstream-176
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-177
Matrix_343AT2G33710Not availableUpstream-178
Matrix_355ERF10;ERF11Not availableUpstream-177
Matrix_385DEAR4Not availableUpstream-177
Matrix_394DREB_UNot availableUpstream-177
Matrix_399TGA1Not availableUpstream-176
Matrix_406ATERF-7Not availableUpstream-176
Matrix_418KNAT6;KNAT2Not availableUpstream-176
Matrix_45DRNNot availableUpstream-176
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-177
Matrix_462ATERF-8Not availableUpstream-176
Matrix_493AT1G22985;AT1G71130Not availableUpstream-177
Matrix_50ATERF14;AT5G43410Not availableUpstream-177
Matrix_506DRNL;ATERF-4Not availableUpstream-177
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-180
Matrix_91CRF3Not availableUpstream-177
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-940
Upstream-223
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-165
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-227
Motif_370TATABOX2TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationUpstream-286