Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchView conserved binding sites
- Gene
- ST01G048470
- Description
- 5&apos-methylthioadenosine/S-adenosylhomocysteine nucleosidase (AHRD V1 **** B9CV74_STACP); contains Interpro domain(s) IPR018017 Nucleoside phosphorylase, family 1
- Alias
- gene:Sotub01g048470;Sotub01g048470.1.1;Sotub01g048470;Sotub01g048470.1.1
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -494 |
| Upstream | -487 | |||
| Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -494 |
| Upstream | -487 |