View conserved binding sites


Gene
ST01G019160
Description
RING finger protein 43 (AHRD V1 *--- RNF43_HUMAN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Alias
gene:Sotub01g019160;Sotub01g019160.1.1;Sotub01g019160;Sotub01g019160.1.1
Binding siteNameDescriptionLocationPosition
Matrix_211MYB3Not availableUpstream-487
Matrix_299PFG3Not availableUpstream-486
Matrix_372ANAC81DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virusUpstream-255
Matrix_4ARR14Not availableUpstream-413
Motif_188CDA1ATCAB2CDA-1 (CAB2 DET1-associated factor 1) binding site in DtRE (dark response element) f of chlorophyll a/b-binding protein2 (CAB2) gene in ArabidopsisDownstream1130
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemDownstream1138