View conserved binding sites


Gene
SL10G005430
Description
Flavoprotein wrbA (AHRD V1 ***- B6U724_MAIZE)%3B contains Interpro domain(s) IPR010089 Flavoprotein WrbA
Alias
Solyc10g005430.2.1;Solyc10g005430.2;Solyc10g005430.2;Solyc10g005430.2.1
Binding siteNameDescriptionLocationPosition
Matrix_269FHY3/FAR1Not availableIntron262
Motif_310ANAERO3CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curatorUpstream-190
Motif_370TATABOX2TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationUpstream-480
Motif_549TBF1The HSF-like transcription factor TBF1 is a major molecular switch for plant growth-to-defense transitionIntron260
Motif_570POLASIG2PolyA signal; poly A signal found in rice alpha-amylase; -10 to -30 in the case of animal genesUpstream-712
Motif_575TATABOX3TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A geneUpstream-801
Upstream-894
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Intron271
Intron270