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BLAST
WorkbenchView conserved binding sites
- Gene
- SL01G050040
- Description
- RING finger protein 13 (AHRD V1 *-*- RNF13_CHICK)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type
- Alias
- Solyc01g050040.2;Solyc01g050040.2.1;Solyc01g050040.2;Solyc01g050040.2.1
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Matrix_179 | AtMYB84;MYB36;MYB68;O49746_ARATH | Not available | Upstream | -1210 |
| Matrix_25 | AP3 | Not available | Upstream | -1129 |
| Matrix_362 | DEAR3 | Not available | Upstream | -1663 |
| Matrix_371 | MYB7;AtMYB6;AtMYB32;ATMYB4 | Not available | Upstream | -1430 |
| Matrix_4 | ARR14 | Not available | Upstream | -770 |
| Upstream | -1171 | |||
| Motif_348 | WBBOXPCWRKY1 | WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in Arabidopsis | Upstream | -958 |
| Motif_51 | MYB46 | Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis | Upstream | -820 |
| Upstream | -1429 |