View conserved binding sites


Gene
PT13G02580
Description
Putative RING-H2 finger protein ATL36
Alias
PAC:26995068;Potri.013G025800.1;Potri.013G025800.1;Potri.013G025800
Binding siteNameDescriptionLocationPosition
Matrix_109GBF3Not availableUpstream-297
Upstream-299
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-295
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-294
Matrix_178HSFB2ANot availableUpstream-315
Matrix_24POC1Not availableUpstream-136
Upstream-294
Matrix_247PIF3Not availableUpstream-298
Matrix_296GBF2Not availableUpstream-298
Upstream-299
Matrix_300bZIP68;bZIP16Not availableUpstream-298
Upstream-299
Matrix_301PIL5Not availableUpstream-135
Upstream-293
Matrix_305PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-296
Matrix_331GBF1Not availableUpstream-297
Upstream-299
Matrix_345POC1Not availableUpstream-294
Upstream-295
Matrix_348AT5G51910Not availableUpstream-235
Matrix_493AT1G22985;AT1G71130Not availableUpstream-129
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-289
Motif_603SITEIIATCYTCSite II element found in the promoter regions of cytochrome genes (Cytc-1, Cytc-2) in Arabidopsis; Located between -147 and -156 from the translational starts sites;Overrepresented in the promoters of nuclear genes encoding components of the oxidative phosphorylation (OxPhos) machinery from both Arabidopsis and riceUpstream-295
Motif_630WBOXNTCHN48W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobaccoUpstream-285
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-290