PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: PT02G11190
Description: Tubulin alpha
Alias: PAC:27022489;Potri.002G111900;Potri.002G111900.1;Potri.002G111900.1

Binding site	Name	Description	Location	Position
Matrix_110	ATABI4;AT3G57600	Not available	Upstream	-630
Matrix_141	AT3G25990	Not available	Upstream	-212
Matrix_143	GATA14;GATA6;GATA5	Not available	Intron	123
Matrix_195	GATA2;GATA4	Not available	Intron	122
Matrix_196	TCP20;AT5G41030	Not available	Upstream	-524
Matrix_203	GATA9;GATA12	Not available	Intron	122
			Intron	275
Matrix_25	AP3	Not available	Upstream	-46
Matrix_408	GATA12	Not available	Intron	122
Matrix_505	GATA8	Not available	Intron	123
Matrix_507	TCP3	Not available	Upstream	-487
Motif_171	TCP binding consensus	found enriched in peaks in chip-seq data for SEP3	Upstream	-212
Motif_309	GATA promoter motif	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	Upstream	-97
Motif_323	MYB1LEPR	Tomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG))	Upstream	-218
Motif_375	ERELEE4	ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter region	Upstream	-349
Motif_419	MYB4 binding site motif	Not available	Upstream	-218
Motif_503	EECCRCAH1	EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1	Upstream	-48
Motif_618	MYB1AT	MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis	Upstream	-320
			Upstream	-314
Motif_65	BS1EGCCR	BS1 (binding site 1) found in E. gunnii Cinnamoyl-CoA reductase (CCR) gene promoter; nuclear protein binding site; Required for vascular expression	Upstream	-330
Motif_658	GT1CONSENSUS	Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression	Upstream	-96
			Upstream	-47
Motif_683	AtMYB2 BS in RD22	Binding site for MYB (ATMYB2) in dehydration-responsive gene, rd22; MYB binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -141 of rd22 gene; Also MYC at ca. -200 of rd22 gene; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression	Upstream	-321