PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: PPE_006G17060
Description: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic
Alias: ppa004026m.g;ppa004026m;PAC:17668846;ppa004026m

Binding site	Name	Description	Location	Position
Matrix_179	AtMYB84;MYB36;MYB68;O49746_ARATH	Not available	Upstream	-760
Matrix_401	MYB55	Not available	Upstream	-760
Matrix_452	MYB46	Not available	Upstream	-760
Matrix_510	AtMYB84	More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana	Upstream	-760
Motif_192	BOXLCOREDCPAL	Consensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitro	Upstream	-763
Motif_254	MYB46;MYB83	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	Upstream	-80
			Upstream	-162
			Upstream	-296
			Upstream	-357
			Upstream	-558
			Upstream	-763
			Upstream	-799
Motif_279	POLASIG3	Plant polyA signal; Consensus sequence for plant polyadenylation signal	Downstream	9212
			Downstream	9209
Motif_285	HDZIP2ATATHB2	Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own gene	Downstream	9210
Motif_292	MYBPZM	Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes	Upstream	-350
			Upstream	-763
			Upstream	-803
			Upstream	-808
Motif_419	MYB4 binding site motif	Not available	Upstream	-80
			Upstream	-162
			Upstream	-220
			Upstream	-296
			Upstream	-357
			Upstream	-558
			Upstream	-763
			Upstream	-799
Motif_426	MYB58;MYB63	MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis	Upstream	-763
Motif_51	MYB46	Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis	Upstream	-80
			Upstream	-162
			Upstream	-296
			Upstream	-357
			Upstream	-557
			Upstream	-763
Motif_666	MYB binding site promoter	A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes	Upstream	-80
			Upstream	-162
			Upstream	-763
			Upstream	-799