View conserved binding sites


Gene
PPE_004G18070
Description
No description available
Alias
ppa019576m.g;ppa019576m;PAC:17660807;ppa019576m
Binding siteNameDescriptionLocationPosition
Matrix_48PINot availableUpstream-394
Motif_1GT1CORECritical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complexUpstream-571
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-352
Upstream-354
Upstream-356
Upstream-358
Upstream-360
Upstream-362
Upstream-364
Upstream-366
Upstream-368
Upstream-370
Upstream-372
Upstream-374
Upstream-376
Upstream-378
Upstream-380
Upstream-382
Upstream-384
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-352
Upstream-354
Upstream-356
Upstream-358
Upstream-360
Upstream-362
Upstream-364
Upstream-366
Upstream-368
Upstream-370
Upstream-372
Upstream-374
Upstream-376
Upstream-378
Upstream-380
Upstream-382
Upstream-384
Upstream-386
Motif_628TATCCAOSAMYTATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2Upstream-873
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-351
Upstream-353
Upstream-355
Upstream-357
Upstream-359
Upstream-361
Upstream-363
Upstream-365
Upstream-367
Upstream-369
Upstream-371
Upstream-373
Upstream-375
Upstream-377
Upstream-379
Upstream-381
Upstream-383
Upstream-385
Upstream-387
Upstream-389
Upstream-391
Upstream-393
Upstream-503
Upstream-505
Upstream-507
Upstream-509
Upstream-639
Upstream-641
Upstream-643