Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -176 |
Matrix_138 | RRTF1 | Not available | Upstream | -174 |
Matrix_146 | ORA47 | Not available | Upstream | -175 |
Matrix_173 | ZAP1 | Not available | Upstream | -175 |
Matrix_190 | ATERF1 | Not available | Upstream | -176 |
Matrix_234 | RAP2.3 | Not available | Upstream | -175 |
Matrix_252 | RAP2.6 | Not available | Upstream | -175 |
Matrix_261 | ATERF-1 | Not available | Upstream | -174 |
Matrix_288 | RAP2.3 | Not available | Upstream | -174 |
Matrix_301 | PIL5 | Not available | Upstream | -1412 |
Matrix_323 | BIM3 | Not available | Upstream | -1407 |
Matrix_343 | AT2G33710 | Not available | Upstream | -175 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -174 |
Matrix_363 | RAP2.3 | Not available | Upstream | -174 |
Matrix_365 | AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1 | Not available | Upstream | -1406 |
Matrix_378 | ATERF1 | Not available | Upstream | -175 |
Matrix_406 | ATERF-7 | Not available | Upstream | -1905 |
Matrix_473 | RRTF1 | Not available | Upstream | -175 |
Matrix_49 | FHY3/FAR1 | Not available | Upstream | -18 |
Matrix_517 | ERF12 | Not available | Upstream | -176 |
Matrix_80 | BIM1 | Not available | Upstream | -1408 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -535 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Downstream | 2135 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Downstream | 2135 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Downstream | 2135 |
Motif_404 | AACACOREOSGLUB1 | Core of AACA motifs found in rice glutelin genes, involved in controlling the endosperm-specific expression; AACA is also closely associated with the GCN4 motif in all rice glutelin genes and together have been shown to confer endosperm-specific enhancement to the truncated -90 CaMV 35S promoter | Upstream | -182 |
Motif_410 | ANAERO1CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curator | Upstream | -183 |
Motif_419 | MYB4 binding site motif | Not available | Upstream | -182 |
Motif_609 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -182 |
Motif_666 | MYB binding site promoter | A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes | Upstream | -746 |
Motif_668 | TCA1MOTIF | TCA-1 (tobacco nuclear protein 1) binding site; Related to salicylic acid-inducible expression of many genes; Found in barley beta-1,3-glucanase and over 30 different plant genes which are known to be induced by one or more forms of stress; A similar sequence (TCATTTCTT) was found in tobacco Tnt1 retrotransposon promoter | Upstream | -101 |
Motif_672 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -182 |
Motif_72 | GADOWNAT | Sequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABRE | Upstream | -327 |
Motif_88 | MYB2AT | Binding site for ATMYB2, an Arabidopsis MYB homolog; ATMYB2 binds oligonucleotides that contained a consensus MYB recognition sequence (TAACTG), such as is in the SV40 enhancer and the maize bronze-1 promoter; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis | Downstream | 2135 |