View conserved binding sites


Gene
GM18G53870
Description
Ras-related protein Rab
Alias
Glyma18g53870;Glyma18g53870.1;PAC:26357319;Glyma18g53870.1
Binding siteNameDescriptionLocationPosition
Matrix_48PINot availableUpstream-25
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-15
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-15
Upstream-17
Motif_667TATABOXOSPALBinding site for OsTBP2, found in the promoter of rice pal gene encoding phenylalanine ammonia-lyase; OsTFIIB stimulated the DNA binding and bending activities of OsTBP2 and synergistically enhanced OsTBP2-mediated transcription from the pal promoterUpstream-496
Upstream-799
Upstream-1525
Upstream-1534
Upstream-1547
Upstream-1745
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-14
Upstream-16
Upstream-18
Upstream-20
Upstream-22
Upstream-24