View conserved binding sites


Gene
GM18G49820
Description
Cyclin-dependent kinase
Alias
Glyma18g49820;Glyma18g49820.2;PAC:26354230;Glyma18g49820.2
Binding siteNameDescriptionLocationPosition
Matrix_110ATABI4;AT3G57600Not availableUpstream-21
Upstream-22
Upstream-26
Upstream-27
Matrix_117ANTNot availableUpstream-26
Matrix_143GATA14;GATA6;GATA5Not availableUpstream-216
Upstream-217
Matrix_146ORA47Not availableUpstream-24
Matrix_203GATA9;GATA12Not availableUpstream-214
Upstream-215
Matrix_224ERF1Not availableUpstream-28
Matrix_250ADAP;AT1G79700;WRI1;ANTNot availableUpstream-23
Matrix_272DEAR4Not availableUpstream-24
Matrix_280TCP24;TCP1;BRC2;ATTCP18Not availableUpstream-21
Matrix_333GATA3Not availableUpstream-214
Upstream-215
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-25
Matrix_409DEAR3Not availableUpstream-25
Matrix_488ABF1Not availableUpstream-10
Motif_104CAREOSREP1CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-209
Upstream-568
Upstream-573
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-315
Upstream-317
Motif_310ANAERO3CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curatorUpstream-448
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-131
Upstream-133
Upstream-135
Upstream-137
Upstream-139
Upstream-141
Upstream-143
Upstream-145
Upstream-147
Upstream-315
Upstream-317
Upstream-319
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-229
Motif_563PYRIMIDINEBOXOSRAMY1APyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this siteUpstream-550
Upstream-642
Upstream-804
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-38
Upstream-230
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-153
Upstream-155
Upstream-191
Upstream-193
Upstream-195
Upstream-316
Upstream-318
Upstream-320
Upstream-322
Upstream-324
Upstream-326