View conserved binding sites


Gene
GM17G01630
Description
repeat domain-containing protein 13C
Alias
Glyma17g01630;Glyma17g01630.1;PAC:26313384;Glyma17g01630.1
Binding siteNameDescriptionLocationPosition
Matrix_117ANTNot availableUpstream-124
Matrix_130TCP16Not availableIntron1467
Matrix_144AT5G08330;AT5G23280Not availableIntron1467
Matrix_196TCP20;AT5G41030Not availableIntron1465
Intron1513
Matrix_216TCP16Not availableIntron1467
Matrix_232TCP23Not availableIntron1466
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsIntron1467
Matrix_281TCP13Not availableIntron1467
Matrix_294MEE35Not availableIntron1467
Matrix_297TCP15Not availableIntron1466
Intron1514
Matrix_348AT5G51910Not availableIntron1467
Intron1515
Matrix_40TCP2Not availableIntron1467
Matrix_42AT2G45680Not availableIntron1467
Matrix_507TCP3Not availableIntron1466
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-571
Motif_614MYBGAHVCentral element of gibberellin (GA) response complex (GARC) in high-pI alpha-amylase gene in barley; Similar to c-myb and v-myb consensus binding site; GAmyb binds specifically to the TAACAAA box in vitro; GAmyb is the sole GA-regulated transcriptional factor required for transcriptional activation of the high-pI alpha-amylase; GARC consist of the pyrimidine, TAACAAA and TATCCAC boxes; GARE in RAmy1A gene; GARE and pyrimidine box in RAmy1A are partially involved in sugar repressionUpstream-571