View conserved binding sites


Gene
GM12G34250
Description
No description available
Alias
Glyma12g34250;Glyma12g34250.2;PAC:26292379;Glyma12g34250.2
Binding siteNameDescriptionLocationPosition
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-118
Upstream-119
Upstream-127
Upstream-128
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-126
Matrix_120BEE2Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_122ABF1;AREB2Not availableUpstream-118
Upstream-119
Matrix_133DYT1Not availableUpstream-120
Upstream-123
Matrix_14ZCW32;AT5G62610Not availableUpstream-120
Upstream-121
Upstream-129
Upstream-130
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-115
Upstream-116
Upstream-125
Matrix_153AP2Not availableUpstream-118
Upstream-119
Upstream-127
Upstream-128
Matrix_156POC1Not availableUpstream-118
Upstream-127
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_191PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-116
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_24POC1Not availableUpstream-115
Upstream-116
Upstream-125
Matrix_264ATAREB1Not availableUpstream-116
Upstream-117
Matrix_27ATAIB;ATNIG1Not availableUpstream-120
Upstream-129
Matrix_301PIL5Not availableUpstream-115
Upstream-120
Upstream-121
Upstream-123
Upstream-124
Matrix_320MYC4Not availableUpstream-120
Upstream-121
Upstream-129
Upstream-130
Matrix_323BIM3Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_330MYC2;TT8Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_332SPT;ALCNot availableUpstream-120
Upstream-121
Upstream-129
Upstream-130
Matrix_345POC1Not availableUpstream-116
Matrix_356PRR5Not availableUpstream-116
Upstream-117
Matrix_363RAP2.3Not availableUpstream-517
Matrix_365AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1Not availableUpstream-120
Upstream-121
Upstream-129
Upstream-130
Matrix_369AT2G18300Not availableUpstream-117
Upstream-118
Upstream-119
Upstream-120
Upstream-126
Upstream-127
Upstream-128
Upstream-129
Matrix_389ILR3Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_403BZR1Not availableUpstream-117
Matrix_438AtbZIP63Not availableUpstream-119
Matrix_449BIM2Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_465MYC4Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_480BES1Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_488ABF1Not availableUpstream-112
Matrix_514DYT1Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen developmentUpstream-126
Matrix_53MYC3Not availableUpstream-117
Upstream-118
Upstream-121
Upstream-122
Upstream-126
Upstream-127
Matrix_64PIF5Not availableUpstream-120
Upstream-129
Matrix_7PIF4Not availableUpstream-119
Upstream-120
Upstream-128
Upstream-129
Matrix_77PRR5Not availableUpstream-117
Upstream-118
Upstream-126
Upstream-127
Matrix_80BIM1Not availableUpstream-118
Upstream-119
Upstream-120
Upstream-121
Upstream-127
Upstream-128
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-120
Upstream-122
Upstream-129
Upstream-131
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-121
Upstream-130
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-121
Upstream-130
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-120
Upstream-129
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-552
Motif_256RHE_elementFunctional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution PatternsUpstream-122
Upstream-125
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-121
Upstream-130
Motif_57ABREOSRAB21ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em geneUpstream-118
Motif_6492SSEEDPROTBANAPAConserved in many storage-protein gene promoters; May be important for high activity of the napA promoterDownstream11849
Motif_70CANBNNAPACore of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressorDownstream11849