View conserved binding sites


Gene
GM12G10240
Description
Fasciclin-like arabinogalactan protein
Alias
Glyma12g10240;Glyma12g10240.1;PAC:26294052;Glyma12g10240.1
Binding siteNameDescriptionLocationPosition
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-1161
Matrix_196TCP20;AT5G41030Not availableUpstream-1162
Matrix_216TCP16Not availableUpstream-1160
Matrix_264ATAREB1Not availableUpstream-185
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsUpstream-1160
Matrix_294MEE35Not availableUpstream-1162
Matrix_362DEAR3Not availableUpstream-155
Matrix_403BZR1Not availableUpstream-183
Matrix_438AtbZIP63Not availableUpstream-183
Matrix_507TCP3Not availableUpstream-1161
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-154
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-155
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-901
Motif_54LTREATLTI78Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thalianaUpstream-154
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-155
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-155