View conserved binding sites


Gene
GM10G04850
Description
CLIP-associated protein
Alias
Glyma10g04850;Glyma10g04850.1;PAC:26343699;Glyma10g04850.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-72
Matrix_171LBD3;LBD4Not availableUpstream-21
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-144
Matrix_224ERF1Not availableUpstream-71
Matrix_234RAP2.3Not availableUpstream-72
Matrix_333GATA3Not availableUpstream-10
Matrix_375AtSPL8Not availableIntron10289
Matrix_451STY1Not availableIntron8365
Matrix_453EIL3Not availableIntron5737
Intron19243
Matrix_458MGP;AT1G14580;AtIDD7;AtIDD5;AtIDD4;AtIDD12;JKD;AT5G66730Not availableIntron8362
Matrix_473RRTF1Not availableUpstream-72
Matrix_496ATMYB15Not availableUpstream-67
Matrix_505GATA8Not availableUpstream-30
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsIntron8352
Motif_332SV40COREENHANSV40 core enhancer; Similar sequences found in rbcS genesUpstream-332
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsIntron8361
Motif_552MRE1MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1Downstream22860
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionIntron8351