View conserved binding sites


Gene
GM09G18770
Description
CHY zinc finger domain-containing protein 1
Alias
Glyma09g18770;Glyma09g18770.1;PAC:26341923;Glyma09g18770.1
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-203
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1339
Matrix_113ABI5Not availableUpstream-203
Upstream-205
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-1337
Matrix_120BEE2Not availableUpstream-204
Upstream-1340
Matrix_122ABF1;AREB2Not availableUpstream-203
Matrix_129ABF1Not availableUpstream-204
Matrix_134ABF1Not availableUpstream-205
Matrix_14ZCW32;AT5G62610Not availableUpstream-1341
Matrix_145GBF4;AT5G44080Not availableUpstream-205
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-200
Matrix_156POC1Not availableUpstream-205
Upstream-1339
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-204
Upstream-1340
Matrix_192FHY3/FAR1Not availableUpstream-205
Matrix_194HYH;HY5Not availableUpstream-201
Upstream-1337
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-204
Upstream-1340
Matrix_214AP1Not availableUpstream-202
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-205
Matrix_24POC1Not availableUpstream-200
Matrix_247PIF3Not availableUpstream-204
Matrix_264ATAREB1Not availableUpstream-201
Upstream-204
Matrix_296GBF2Not availableUpstream-205
Matrix_300bZIP68;bZIP16Not availableUpstream-205
Matrix_301PIL5Not availableUpstream-199
Upstream-205
Matrix_320MYC4Not availableUpstream-301
Upstream-1341
Matrix_323BIM3Not availableUpstream-1340
Matrix_330MYC2;TT8Not availableUpstream-204
Upstream-1340
Matrix_331GBF1Not availableUpstream-205
Matrix_332SPT;ALCNot availableUpstream-205
Matrix_338AP2Not availableUpstream-201
Upstream-1337
Matrix_339bHLH104Not availableUpstream-1340
Matrix_356PRR5Not availableUpstream-197
Upstream-201
Upstream-1333
Upstream-1337
Matrix_365AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1Not availableUpstream-301
Upstream-1341
Matrix_369AT2G18300Not availableUpstream-1338
Matrix_389ILR3Not availableUpstream-204
Upstream-1340
Matrix_399TGA1Not availableUpstream-1062
Matrix_403BZR1Not availableUpstream-202
Upstream-1338
Matrix_438AtbZIP63Not availableUpstream-202
Matrix_443AGL15Not availableUpstream-202
Matrix_449BIM2Not availableUpstream-1340
Matrix_465MYC4Not availableUpstream-204
Upstream-1340
Matrix_480BES1Not availableUpstream-203
Upstream-204
Upstream-1340
Matrix_488ABF1Not availableUpstream-1339
Matrix_53MYC3Not availableUpstream-1338
Matrix_55PIF3Not availableUpstream-203
Matrix_60AT1G01260;AT5G57150Not availableUpstream-205
Matrix_64PIF5Not availableUpstream-301
Upstream-1341
Matrix_7PIF4Not availableUpstream-206
Upstream-1340
Matrix_77PRR5Not availableUpstream-1338
Matrix_80BIM1Not availableUpstream-203
Upstream-1060
Upstream-1339
Upstream-1341
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-300
Upstream-302
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-205
Upstream-301
Upstream-1341
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-204
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-204
Upstream-205
Upstream-300
Motif_244ABRE-like binding site motifNot availableUpstream-205
Motif_256RHE_elementFunctional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution PatternsUpstream-1429
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-205
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-205
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-203
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-206
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-206
Motif_638ABRE binding site motifNot availableUpstream-205