View conserved binding sites


Gene
GM08G42861
Description
translation factor SUI1
Alias
Glyma08g42861;Glyma08g42861.1;PAC:26308518;Glyma08g42861.1
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-94
Matrix_129ABF1Not availableUpstream-95
Matrix_145GBF4;AT5G44080Not availableUpstream-96
Matrix_166TGA4Not availableUpstream-124
Matrix_214AP1Not availableUpstream-93
Matrix_232TCP23Not availableUpstream-53
Upstream-298
Upstream-301
Matrix_264ATAREB1Not availableUpstream-92
Matrix_297TCP15Not availableUpstream-298
Upstream-301
Matrix_348AT5G51910Not availableUpstream-299
Upstream-300
Matrix_356PRR5Not availableUpstream-92
Matrix_387ORA47Not availableUpstream-100
Matrix_395AT1G19210;ORA47;AT4G31060;AT5G21960Not availableUpstream-101
Matrix_403BZR1Not availableUpstream-93
Matrix_42AT2G45680Not availableUpstream-299
Upstream-300
Matrix_443AGL15Not availableUpstream-93
Matrix_55PIF3Not availableUpstream-94
Matrix_65POC1;PIL1Not availableUpstream-96
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-96
Motif_189CMSRE1IBSPOACMSRE-1 (Carbohydrate Metabolite Signal Responsive Element 1) found in the promoter of sweet potato sporamin A geneUpstream-100
Motif_193GLK1GLK transcription factors coordinate expression of the photosynthetic apparatus in ArabidopsisUpstream-707
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-96
Motif_195TATABOX4TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationDownstream2411
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-95
Upstream-96
Upstream-204
Upstream-205
Upstream-231
Motif_244ABRE-like binding site motifNot availableUpstream-94
Upstream-96
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalDownstream2415
Motif_303VOZATVPPVOZ-binding sequence found in the promoter of A. thaliana V-PPase (vacuolar H+-pyrophosphatase) gene; Involved in its expression during pollen development; one-zinc fingerUpstream-221
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-205
Upstream-232
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-96
Motif_392PALBOXAPCBox A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box LUpstream-101
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-96