| Matrix_10 | STY1 | Not available | Upstream | -2 |
| Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -1863 |
| Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -1860 |
| Matrix_156 | POC1 | Not available | Upstream | -1863 |
| Matrix_179 | AtMYB84;MYB36;MYB68;O49746_ARATH | Not available | Upstream | -133 |
| Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -1864 |
| Matrix_211 | MYB3 | Not available | Upstream | -136 |
| Matrix_299 | PFG3 | Not available | Upstream | -136 |
| Matrix_301 | PIL5 | Not available | Upstream | -1859 |
| Matrix_315 | MYB111 | Not available | Upstream | -136 |
| Matrix_320 | MYC4 | Not available | Upstream | -1865 |
| Matrix_323 | BIM3 | Not available | Upstream | -1864 |
| Matrix_339 | bHLH104 | Not available | Upstream | -1864 |
| Matrix_365 | AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1 | Not available | Upstream | -1865 |
| Matrix_369 | AT2G18300 | Not available | Upstream | -1864 |
| Matrix_403 | BZR1 | Not available | Upstream | -1862 |
| Matrix_449 | BIM2 | Not available | Upstream | -1864 |
| Matrix_55 | PIF3 | Not available | Upstream | -1863 |
| Matrix_60 | AT1G01260;AT5G57150 | Not available | Upstream | -1865 |
| Matrix_64 | PIF5 | Not available | Upstream | -1865 |
| Matrix_7 | PIF4 | Not available | Upstream | -1864 |
| Matrix_80 | BIM1 | Not available | Upstream | -1863 |
| Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -1866 |
| Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -1865 |
| Motif_192 | BOXLCOREDCPAL | Consensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitro | Upstream | -136 |
| | | Upstream | -835 |
| Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -1864 |
| | | Upstream | -1865 |
| Motif_292 | MYBPZM | Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes | Upstream | -136 |
| | | Upstream | -835 |
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