View conserved binding sites


Gene
GM04G25060
Description
Preprotein translocase subunit SECY, chloroplastic
Alias
Glyma04g25060;Glyma04g25060.1;PAC:26305971;Glyma04g25060.1
Binding siteNameDescriptionLocationPosition
Motif_317GAREATGARE (GA-responsive element); Occurrence of GARE in GA-inducible, GA-responsible, and GA-nonresponsive genes found in Arabidopsis seed germination was 20, 18, and 12%, respectivelyUpstream-372
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-372
Motif_614MYBGAHVCentral element of gibberellin (GA) response complex (GARC) in high-pI alpha-amylase gene in barley; Similar to c-myb and v-myb consensus binding site; GAmyb binds specifically to the TAACAAA box in vitro; GAmyb is the sole GA-regulated transcriptional factor required for transcriptional activation of the high-pI alpha-amylase; GARC consist of the pyrimidine, TAACAAA and TATCCAC boxes; GARE in RAmy1A gene; GARE and pyrimidine box in RAmy1A are partially involved in sugar repressionUpstream-372
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-242
Upstream-297
Upstream-299
Upstream-302
Upstream-679
Upstream-680
Upstream-681
Upstream-682
Upstream-683
Upstream-684
Upstream-685
Upstream-1019
Upstream-1210
Upstream-1928