View conserved binding sites


Gene
GM04G05755
Description
No description available
Alias
Glyma04g05755;Glyma04g05755.1;PAC:26303429;Glyma04g05755.1
Binding siteNameDescriptionLocationPosition
Matrix_138RRTF1Not availableUpstream-84
Matrix_183BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-214
Matrix_234RAP2.3Not availableUpstream-85
Matrix_288RAP2.3Not availableUpstream-84
Matrix_308INONot availableUpstream-215
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-84
Matrix_355ERF10;ERF11Not availableUpstream-84
Matrix_363RAP2.3Not availableUpstream-84
Matrix_378ATERF1Not availableUpstream-85
Matrix_426CRF1;CRF2Not availableUpstream-86
Matrix_462ATERF-8Not availableUpstream-97
Matrix_473RRTF1Not availableUpstream-85
Matrix_489RAV1Not availableUpstream-92
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-84
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-86
Matrix_91CRF3Not availableUpstream-85
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-225
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-225
Motif_235C8GCARGATBinding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15)Downstream2119
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisDownstream2117
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-225
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisDownstream2116
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-271
Motif_88MYB2ATBinding site for ATMYB2, an Arabidopsis MYB homolog; ATMYB2 binds oligonucleotides that contained a consensus MYB recognition sequence (TAACTG), such as is in the SV40 enhancer and the maize bronze-1 promoter; ATMYB2 is involved in regulation of genes that are responsive to water stress in ArabidopsisUpstream-225