View conserved binding sites


Gene
GM04G03381
Description
MSMEG_5435/MSMEI_5285
Alias
Glyma04g03381;Glyma04g03381.1;PAC:26304746;Glyma04g03381.1
Binding siteNameDescriptionLocationPosition
Matrix_201AT1G74840Not availableUpstream-171
Matrix_421GLK1Not availableUpstream-170
Matrix_8KAN1Not availableUpstream-170
Upstream-171
Motif_131P1BSPHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtiiUpstream-171
Upstream-184
Motif_210REBETALGLHCB21REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulationUpstream-174
Motif_258-10PEHVPSBD-10 promoter element found in the barley (H.v.) chloroplast psbD gene promoter; Involved in the expression of the plastid gene psbD which encodes a photosystem II reaction center chlorophyll-binding protein that is activated by blue, white or UV-A lightUpstream-183
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-164
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-347
Upstream-415
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-840
Upstream-954