View conserved binding sites


Gene
GM02G18890
Description
of polycomb homolog 2
Alias
Glyma02g18890;Glyma02g18890.1;PAC:26288408;Glyma02g18890.1
Binding siteNameDescriptionLocationPosition
Matrix_180SPL1Not availableUpstream-3
Matrix_187CDC5Not availableUpstream-422
Matrix_191PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-616
Matrix_199AT1G69170;SPL9;SPL15;SPL13A;SPL13BNot availableUpstream-3
Upstream-4
Matrix_229CDC5A cdc5+ homolog of a higher plant, Arabidopsis thalianaUpstream-422
Matrix_25AP3Not availableUpstream-341
Matrix_269FHY3/FAR1Not availableUpstream-432
Matrix_307RGL2;RGL3Not availableUpstream-2
Matrix_31SPL1Not availableUpstream-2
Upstream-4
Matrix_328AT1G76580Not availableUpstream-3
Matrix_349CDC5Not availableUpstream-422
Matrix_396AP3Not availableUpstream-403
Upstream-404
Matrix_414AGL15Not availableUpstream-333
Upstream-340
Upstream-435
Matrix_450SPL7Not availableUpstream-2
Upstream-4
Matrix_48PINot availableUpstream-432
Upstream-441
Matrix_85SPL5Not availableUpstream-3
Motif_1GT1CORECritical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complexUpstream-509
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-373
Motif_150RBCSCONSENSUSrbcS general consensus sequence; AATCCAA or AATCCAACUpstream-490
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-487
Motif_193GLK1GLK transcription factors coordinate expression of the photosynthetic apparatus in ArabidopsisUpstream-493
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-487
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-290
Upstream-398
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-487
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-405
Motif_411PRECONSCRHSP70AConsensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and lightUpstream-43
Upstream-149
Motif_609AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-517
Motif_672AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-517
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-331
Upstream-333
Upstream-335
Upstream-367
Upstream-458
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-374