View conserved binding sites


Gene
GM01G37940
Description
Tubby-like F-box protein
Alias
Glyma01g37940;Glyma01g37940.1;PAC:26325882;Glyma01g37940.1
Binding siteNameDescriptionLocationPosition
Matrix_105SPL14Not availableUpstream-744
Upstream-743
Matrix_119RRTF1Not availableUpstream-745
Matrix_122ABF1;AREB2Not availableUpstream-921
Matrix_134ABF1Not availableUpstream-921
Matrix_138RRTF1Not availableUpstream-745
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-924
Matrix_224ERF1Not availableUpstream-742
Matrix_243RAP2.12;RAP2.2Not availableUpstream-743
Matrix_252RAP2.6Not availableUpstream-741
Matrix_261ATERF-1Not availableUpstream-732
Matrix_272DEAR4Not availableUpstream-741
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-745
Matrix_333GATA3Not availableUpstream-597
Matrix_355ERF10;ERF11Not availableUpstream-745
Matrix_362DEAR3Not availableUpstream-741
Matrix_363RAP2.3Not availableUpstream-745
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-744
Upstream-741
Matrix_378ATERF1Not availableUpstream-744
Upstream-741
Matrix_409DEAR3Not availableUpstream-742
Matrix_426CRF1;CRF2Not availableUpstream-743
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-742
Matrix_463HAT3.1Not availableUpstream-740
Matrix_473RRTF1Not availableUpstream-741
Matrix_480BES1Not availableUpstream-922
Matrix_493AT1G22985;AT1G71130Not availableUpstream-744
Matrix_506DRNL;ATERF-4Not availableUpstream-743
Matrix_55PIF3Not availableUpstream-922
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-745
Upstream-742
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-743
Matrix_91CRF3Not availableUpstream-744
Upstream-732
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-921
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesDownstream2079
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-921
Motif_419MYB4 binding site motifNot availableDownstream2079
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-746
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisDownstream2078
Motif_618MYB1ATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in ArabidopsisDownstream2082
Motif_641LRENPCABELRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241Upstream-922
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-748
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-748
Motif_92ABREATRD22ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22Upstream-922