Motif_129 | GAGAGMGSA1 | GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNA | Intron | 2930 |
| | | Intron | 2932 |
| | | Intron | 2934 |
| | | Intron | 2936 |
| | | Intron | 2938 |
| | | Intron | 2940 |
| | | Intron | 2942 |
Motif_441 | GAGA8HVBKN3 | GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBR | Intron | 2930 |
| | | Intron | 2932 |
| | | Intron | 2934 |
| | | Intron | 2936 |
| | | Intron | 2938 |
| | | Intron | 2940 |
| | | Intron | 2942 |
| | | Intron | 2944 |
Motif_525 | CRTDREHVCBF2 | Preferred sequence for AP2 transcriptional activator HvCBF2 of barley; Core CRT/DRE motif; HvCBF2 bound to a (G/a)(T/c)CGAC core motif; DNA binding is regulated by temperature | Upstream | -424 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -36 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Intron | 2930 |
| | | Intron | 2932 |
| | | Intron | 2934 |
| | | Intron | 2936 |
| | | Intron | 2938 |
| | | Intron | 2940 |
| | | Intron | 2942 |
| | | Intron | 2944 |
| | | Intron | 2946 |
| | | Intron | 2948 |
| | | Intron | 2950 |
| | | Intron | 2952 |