View conserved binding sites


Gene
EG0006G20450
Description
No description available
Alias
Eucgr.F02496;Eucgr.F02496.1;PAC:23583324;Eucgr.F02496.1
Binding siteNameDescriptionLocationPosition
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAIntron2930
Intron2932
Intron2934
Intron2936
Intron2938
Intron2940
Intron2942
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRIntron2930
Intron2932
Intron2934
Intron2936
Intron2938
Intron2940
Intron2942
Intron2944
Motif_525CRTDREHVCBF2Preferred sequence for AP2 transcriptional activator HvCBF2 of barley; Core CRT/DRE motif; HvCBF2 bound to a (G/a)(T/c)CGAC core motif; DNA binding is regulated by temperatureUpstream-424
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-36
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAIntron2930
Intron2932
Intron2934
Intron2936
Intron2938
Intron2940
Intron2942
Intron2944
Intron2946
Intron2948
Intron2950
Intron2952