View conserved binding sites


Gene
CM01596G04190
Description
Probable clathrin assembly protein At4g32285
Alias
MELO3C003700;MELO3C003700T2
Binding siteNameDescriptionLocationPosition
Matrix_122ABF1;AREB2Not availableUpstream-1634
Upstream-1635
Matrix_147ERF3;AT1G80580Not availableUpstream-243
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-1691
Matrix_224ERF1Not availableUpstream-245
Matrix_252RAP2.6Not availableUpstream-243
Upstream-246
Matrix_287ERF2Not availableUpstream-243
Upstream-246
Matrix_355ERF10;ERF11Not availableUpstream-242
Matrix_360ORA59Not availableUpstream-246
Matrix_385DEAR4Not availableUpstream-242
Matrix_394DREB_UNot availableUpstream-242
Matrix_395AT1G19210;ORA47;AT4G31060;AT5G21960Not availableUpstream-1691
Matrix_406ATERF-7Not availableUpstream-241
Matrix_426CRF1;CRF2Not availableUpstream-247
Matrix_45DRNNot availableUpstream-243
Matrix_462ATERF-8Not availableUpstream-241
Matrix_480BES1Not availableUpstream-1634
Matrix_50ATERF14;AT5G43410Not availableUpstream-242
Upstream-245
Matrix_506DRNL;ATERF-4Not availableUpstream-244
Upstream-247
Matrix_53MYC3Not availableUpstream-1637
Matrix_79FUS3Not availableUpstream-1637
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-1636
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-1636
Motif_353HEXAMERATH4hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 geneUpstream-829
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-354
Upstream-404
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-355
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-1639
Motif_491GT-1Molecular dissection of GT-1 from ArabidopsisUpstream-688
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-355
Upstream-1943
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-355
Motif_689ANAC092NAC Transcription Factor ORE1 and Senescence-Induced BIFUNCTIONAL NUCLEASE1 (BFN1) Constitute a Regulatory Cascade in ArabidopsisUpstream-1638
Upstream-1639
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-281