View conserved binding sites


Gene
CM00029G01570
Description
Transcription factor
Alias
MELO3C016782;MELO3C016782T1
Binding siteNameDescriptionLocationPosition
Matrix_164AT1G02030;AT2G45120;AZF2;AT3G60580Not availableDownstream2155
Matrix_196TCP20;AT5G41030Not availableUpstream-491
Matrix_198STZ;C2H2;AZF3Not availableDownstream2155
Matrix_216TCP16Not availableDownstream2162
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsDownstream2162
Matrix_280TCP24;TCP1;BRC2;ATTCP18Not availableDownstream2226
Matrix_281TCP13Not availableDownstream2223
Matrix_290AP2Not availableUpstream-425
Matrix_348AT5G51910Not availableDownstream2162
Matrix_379RHL41Not availableDownstream2155
Matrix_436AT3G49930;AZF1Not availableDownstream2155
Matrix_446LBD16Not availableDownstream2228
Matrix_503AT2G37430;AT3G53600Not availableDownstream2155
Matrix_94TCP5Not availableDownstream2223
Motif_171TCP binding consensusfound enriched in peaks in chip-seq data for SEP3Downstream2226
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroDownstream2323
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Downstream2295
Motif_253S1FSORPL21S1F binding site (S1 site) in spinach (S.o.) RPL21 gene encoding the plastid ribosomal protein L21; Negative element; Might play a role in downregulating RPL21 promoter activityDownstream2303
Motif_261S1FBOXSORPS1L21S1F box conserved both in spinach RPS1 and RPL21 genes encoding the plastid ribosomal protein S1 and L21, respectively; Negative element; Might play a role in downregulating RPS1 and RPL21 promoter activityDownstream2303
Motif_382CATATGGMSAURSequence found in NDE element in soybean SAUR (Small Auxin-Up RNA) 15A gene promoter; Involved in auxin responsivenessDownstream2295