View conserved binding sites


Gene
CM00025G01450
Description
Pyrimidine-specific ribonucleoside hydrolase RihA
Alias
MELO3C015361;MELO3C015361T1
Binding siteNameDescriptionLocationPosition
Motif_131P1BSPHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtiiUpstream-884
Motif_153MARABOX1A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR)Upstream-398
Upstream-402
Upstream-406
Motif_22RYREPEATLEGUMINBOXRY repeat (CATGCAY) or legumin box found in seed-storage protein genes in legume such as soybeanUpstream-888
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-397
Upstream-401
Upstream-405
Upstream-409
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-398
Upstream-402
Upstream-406
Upstream-410
Motif_511RYREPEATGMGY2RY repeat motif (CATGCAT); Present in the 5' region of the soybean glycinin gene (Gy2)Upstream-888