View conserved binding sites


Gene
BR08G05160
Description
II 22 kDa protein, chloroplastic
Alias
Bra014024;Bra014024
Binding siteNameDescriptionLocationPosition
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-1577
Matrix_24POC1Not availableUpstream-125
Upstream-126
Upstream-1577
Matrix_251PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-126
Matrix_278AtbZIP44Not availableUpstream-128
Upstream-129
Matrix_403BZR1Not availableUpstream-127
Matrix_418KNAT6;KNAT2Not availableUpstream-109
Matrix_438AtbZIP63Not availableUpstream-129
Upstream-130
Matrix_488ABF1Not availableUpstream-121
Matrix_56BZIP17;BZIP28;BZIP49Not availableUpstream-130
Upstream-131
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-140
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-107
Motif_244ABRE-like binding site motifNot availableUpstream-129
Motif_332SV40COREENHANSV40 core enhancer; Similar sequences found in rbcS genesUpstream-799
Upstream-1391
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-131
Upstream-1058
Upstream-1846
Motif_406ABREBZMRAB28ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissuesUpstream-129
Motif_543TATCCACHVAL21TATCCAC box is a part of the conserved cis-acting response complex (GARC) that most often contain three sequence motifs, the TAACAAA box, or GA-responsive element (GARE); the pyrimidine box, CCTTTT (see S000259); and the TATCCAC box, which are necessary for a full GA responseUpstream-799