View conserved binding sites


Gene
AT5G66360
Description
Ribosomal RNA adenine dimethylase family protein
Alias
DIM1B
Binding siteNameDescriptionLocationPosition
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-1084
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionIntron576
Motif_94UP1ATMSDUp1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-169