View conserved binding sites


Gene
AT5G15490
Description
UDP-glucose 6-dehydrogenase family protein
Alias
UGD3;Q9LF33
Binding siteNameDescriptionLocationPosition
Matrix_143GATA14;GATA6;GATA5Not availableUpstream-483
Upstream-485
Matrix_195GATA2;GATA4Not availableUpstream-312
Matrix_203GATA9;GATA12Not availableUpstream-484
Matrix_242AT2G25820;AT3G16280;AT4G32800;TINY2;tnyNot availableUpstream-571
Matrix_333GATA3Not availableUpstream-722
Upstream-729
Matrix_385DEAR4Not availableUpstream-570
Matrix_394DREB_UNot availableUpstream-570
Matrix_408GATA12Not availableUpstream-484
Matrix_478AT1G01250Not availableUpstream-571
Matrix_505GATA8Not availableUpstream-313
Upstream-485
Matrix_73DEAR3;RAP2.9;RAP2.10Not availableUpstream-571
Matrix_92AT1G33760Not availableUpstream-570
Motif_136SEF4MOTIFGM7SSEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4)Upstream-963
Motif_155NODCON1GMOne of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodulesUpstream-949
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-681
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-1217
Motif_222AGMOTIFNTMYB2AG-motif found at -114 of the promoter of NtMyb2 gene; NtMyb2 is a regulator of the tobacco retrotransposon Tto1 and the defence-related gene phenylalanine ammonia lyase (PAL), which are induced by various stress such as wounding or elicitor treatment; AGP1 (GATA-type zinc finger protein) binding siteUpstream-196
Upstream-693
Motif_357NTBBF1ARROLBNtBBF1(Dof protein from tobacco) binding site in Agrobacterium rhizogenes rolB gene; Found in regulatory domain B (-341 to -306); Required for tissue-specific expression and auxin inductionUpstream-957
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationUpstream-75
Upstream-389
Upstream-658
Upstream-680
Upstream-684
Upstream-967
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-1124
Motif_54LTREATLTI78Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thalianaUpstream-571
Motif_640RYREPEATBNNAPARY repeat found in RY/G box (the complex containing the two RY repeats and the G-box) of napA gene in Brassica napus; Found between -78 and -50; Required for seed specific expression;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABREUpstream-495
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-571