PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: AT5G03730
Description: Protein kinase superfamily protein
Alias: CTR1;Q05609

Binding site	Name	Description	Location	Position
Matrix_29	AP1	Not available	Intron	1172
Matrix_396	AP3	Not available	Upstream	-55
			Upstream	-56
Matrix_407	AP1	Not available	Intron	2223
Matrix_453	EIL3	Not available	Upstream	-1303
Motif_171	TCP binding consensus	found enriched in peaks in chip-seq data for SEP3	Downstream	4778
Motif_183	TRANSINITDICOTS	Context sequence of translational initiation codon in dicots	Upstream	-71
Motif_279	POLASIG3	Plant polyA signal; Consensus sequence for plant polyadenylation signal	Upstream	-780
Motif_321	TATABOX5	TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysis	Upstream	-779
Motif_342	POLASIG1	PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in Arabidopsis	Upstream	-775
Motif_358	UP2ATMSD	Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	Upstream	-56
Motif_404	AACACOREOSGLUB1	Core of AACA motifs found in rice glutelin genes, involved in controlling the endosperm-specific expression; AACA is also closely associated with the GCN4 motif in all rice glutelin genes and together have been shown to confer endosperm-specific enhancement to the truncated -90 CaMV 35S promoter	Upstream	-347
Motif_495	TRANSINITMONOCOTS	Context sequence of translational initiation codon in monocots	Upstream	-71
			Upstream	-1350
Motif_615	MARTBOX	T-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)	Upstream	-775
			Upstream	-930
Motif_69	CTRMCAMV35S	CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA	Upstream	-113
			Upstream	-157
			Upstream	-159
			Upstream	-161
			Upstream	-163
			Upstream	-165
			Upstream	-167
			Upstream	-169
			Upstream	-171
			Upstream	-173
			Upstream	-175
			Upstream	-177
			Upstream	-179
			Upstream	-181
			Upstream	-922