Matrix_128 | TGA2 | Not available | Upstream | -135 |
| | | Upstream | -136 |
| | | Upstream | -137 |
| | | Upstream | -138 |
Matrix_139 | OBF5 | Not available | Upstream | -136 |
| | | Upstream | -137 |
| | | Upstream | -138 |
| | | Upstream | -139 |
Matrix_166 | TGA4 | Not available | Upstream | -135 |
| | | Upstream | -136 |
| | | Upstream | -137 |
| | | Upstream | -138 |
Matrix_228 | TGA2 | Not available | Upstream | -136 |
| | | Upstream | -137 |
Matrix_282 | bZIP60 | Not available | Upstream | -136 |
| | | Upstream | -137 |
Matrix_306 | TGA1 | TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG | Upstream | -133 |
| | | Upstream | -134 |
| | | Upstream | -137 |
| | | Upstream | -138 |
Matrix_311 | TGA1 | Not available | Upstream | -135 |
| | | Upstream | -136 |
| | | Upstream | -137 |
| | | Upstream | -138 |
Matrix_399 | TGA1 | Not available | Upstream | -134 |
| | | Upstream | -135 |
| | | Upstream | -137 |
| | | Upstream | -138 |
Matrix_419 | TGA9;PAN;TGA6;bZIP65 | Not available | Upstream | -135 |
| | | Upstream | -136 |
| | | Upstream | -137 |
| | | Upstream | -138 |
Matrix_432 | AT1G77920 | Not available | Upstream | -135 |
| | | Upstream | -136 |
| | | Upstream | -137 |
| | | Upstream | -138 |
Matrix_457 | TGA2 | Not available | Upstream | -134 |
| | | Upstream | -135 |
| | | Upstream | -138 |
| | | Upstream | -139 |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -27 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -146 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -26 |
| | | Upstream | -437 |
| | | Upstream | -697 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -146 |
Motif_292 | MYBPZM | Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes | Upstream | -168 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -31 |
Motif_33 | ACGTCBOX | C-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding site | Upstream | -138 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -146 |
Motif_453 | HEXMOTIFTAH3H4 | hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site | Upstream | -137 |
| | | Upstream | -139 |
| | | Upstream | -1357 |
Motif_48 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -28 |
Motif_567 | T/GBOXATPIN2 | T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motif | Upstream | -26 |
Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -27 |
Motif_575 | TATABOX3 | TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene | Upstream | -1760 |
Motif_576 | TGACGTVMAMY | TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds | Upstream | -137 |
| | | Upstream | -139 |
| | | Upstream | -1357 |
Motif_583 | AtbZIP1 | The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding | Upstream | -137 |
Motif_685 | PALINDROMICCBOXGM | Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence | Upstream | -137 |