View conserved binding sites


Gene
AT2G35630
Description
ARM repeat superfamily protein
Alias
Q94FN2;GEM1
Binding siteNameDescriptionLocationPosition
Matrix_115AGL15Not availableUpstream-1531
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-131
Matrix_195GATA2;GATA4Not availableIntron2212
Matrix_208AP1Not availableIntron12977
Matrix_222AGL2DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formationIntron2382
Matrix_24POC1Not availableIntron10593
Matrix_25AP3Not availableIntron4647
Intron4996
Intron6055
Matrix_372ANAC81DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virusUpstream-162
Matrix_393REM1Not availableIntron4011
Intron4695
Matrix_433ATERF1Not availableUpstream-133
Matrix_448ATERF6Not availableUpstream-133
Matrix_476bHLH115;bHLH34Not availableUpstream-1346
Matrix_478AT1G01250Not availableDownstream14093
Matrix_48PINot availableUpstream-1369
Matrix_5AT5G51190;ERF104Not availableUpstream-132
Matrix_73DEAR3;RAP2.9;RAP2.10Not availableDownstream14093
Matrix_77PRR5Not availableUpstream-1348
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationUpstream-209
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-202
Motif_618MYB1ATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in ArabidopsisUpstream-210
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-192
Upstream-190
Upstream-147
Upstream-145
Upstream-143
Upstream-141