View conserved binding sites


Gene
AT1G76180
Description
Dehydrin family protein
Alias
P42763;ERD14
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-837
Matrix_113ABI5Not availableUpstream-837
Upstream-839
Matrix_122ABF1;AREB2Not availableUpstream-837
Upstream-838
Matrix_129ABF1Not availableUpstream-838
Matrix_130TCP16Not availableUpstream-1042
Matrix_134ABF1Not availableUpstream-838
Upstream-839
Matrix_144AT5G08330;AT5G23280Not availableUpstream-1042
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-834
Matrix_192FHY3/FAR1Not availableUpstream-835
Upstream-839
Matrix_194HYH;HY5Not availableUpstream-835
Matrix_216TCP16Not availableUpstream-1042
Matrix_24POC1Not availableUpstream-834
Matrix_264ATAREB1Not availableUpstream-835
Upstream-838
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsUpstream-1042
Matrix_294MEE35Not availableUpstream-1044
Matrix_301PIL5Not availableUpstream-833
Matrix_338AP2Not availableUpstream-835
Matrix_348AT5G51910Not availableUpstream-1042
Matrix_356PRR5Not availableUpstream-831
Upstream-835
Matrix_362DEAR3Not availableUpstream-1874
Matrix_40TCP2Not availableUpstream-1042
Matrix_403BZR1Not availableUpstream-836
Matrix_443AGL15Not availableUpstream-836
Matrix_82TCP17Not availableUpstream-1044
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-355
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-839
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-269
Upstream-838
Upstream-839
Upstream-955
Motif_244ABRE-like binding site motifNot availableUpstream-837
Upstream-839
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-159
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-354
Upstream-839
Upstream-1024
Upstream-1038
Upstream-1879
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-894
Upstream-1031
Upstream-1876
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-1032
Upstream-1876
Motif_54LTREATLTI78Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thalianaUpstream-1031
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-1032
Upstream-1876
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-837
Upstream-840
Upstream-956
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-1032
Upstream-1876
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-837
Upstream-840
Upstream-956