Matrix_104 | PI | Not available | Upstream | -837 |
Matrix_113 | ABI5 | Not available | Upstream | -837 |
| | | Upstream | -839 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -837 |
| | | Upstream | -838 |
Matrix_129 | ABF1 | Not available | Upstream | -838 |
Matrix_130 | TCP16 | Not available | Upstream | -1042 |
Matrix_134 | ABF1 | Not available | Upstream | -838 |
| | | Upstream | -839 |
Matrix_144 | AT5G08330;AT5G23280 | Not available | Upstream | -1042 |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -834 |
Matrix_192 | FHY3/FAR1 | Not available | Upstream | -835 |
| | | Upstream | -839 |
Matrix_194 | HYH;HY5 | Not available | Upstream | -835 |
Matrix_216 | TCP16 | Not available | Upstream | -1042 |
Matrix_24 | POC1 | Not available | Upstream | -834 |
Matrix_264 | ATAREB1 | Not available | Upstream | -835 |
| | | Upstream | -838 |
Matrix_266 | TCP16 | Determinants of the DNA binding specificity of class I and class II TCP transcription factors | Upstream | -1042 |
Matrix_294 | MEE35 | Not available | Upstream | -1044 |
Matrix_301 | PIL5 | Not available | Upstream | -833 |
Matrix_338 | AP2 | Not available | Upstream | -835 |
Matrix_348 | AT5G51910 | Not available | Upstream | -1042 |
Matrix_356 | PRR5 | Not available | Upstream | -831 |
| | | Upstream | -835 |
Matrix_362 | DEAR3 | Not available | Upstream | -1874 |
Matrix_40 | TCP2 | Not available | Upstream | -1042 |
Matrix_403 | BZR1 | Not available | Upstream | -836 |
Matrix_443 | AGL15 | Not available | Upstream | -836 |
Matrix_82 | TCP17 | Not available | Upstream | -1044 |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -355 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -839 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -269 |
| | | Upstream | -838 |
| | | Upstream | -839 |
| | | Upstream | -955 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -837 |
| | | Upstream | -839 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -159 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -354 |
| | | Upstream | -839 |
| | | Upstream | -1024 |
| | | Upstream | -1038 |
| | | Upstream | -1879 |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | Upstream | -894 |
| | | Upstream | -1031 |
| | | Upstream | -1876 |
Motif_454 | DRECRTCOREAT | Core motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower) | Upstream | -1032 |
| | | Upstream | -1876 |
Motif_54 | LTREATLTI78 | Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thaliana | Upstream | -1031 |
Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | Upstream | -1032 |
| | | Upstream | -1876 |
Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | Upstream | -837 |
| | | Upstream | -840 |
| | | Upstream | -956 |
Motif_643 | DRE2COREZMRAB17 | DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABA | Upstream | -1032 |
| | | Upstream | -1876 |
Motif_72 | GADOWNAT | Sequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABRE | Upstream | -837 |
| | | Upstream | -840 |
| | | Upstream | -956 |