View conserved binding sites


Gene
AT1G63470
Description
AT hook motif DNA-binding family protein
Alias
Not available
Binding siteNameDescriptionLocationPosition
Matrix_132SOC1Not availableUpstream-50
Upstream-362
Matrix_184AGL15Not availableDownstream2152
Matrix_25AP3Not availableUpstream-383
Matrix_372ANAC81DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virusUpstream-360
Matrix_396AP3Not availableUpstream-8
Upstream-101
Matrix_414AGL15Not availableUpstream-362
Matrix_48PINot availableUpstream-385
Motif_183TRANSINITDICOTSContext sequence of translational initiation codon in dicotsUpstream-133
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-8
Upstream-101
Motif_375ERELEE4ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter regionUpstream-283
Motif_495TRANSINITMONOCOTSContext sequence of translational initiation codon in monocotsUpstream-133
Motif_563PYRIMIDINEBOXOSRAMY1APyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this siteUpstream-52
Upstream-364
Upstream-511
Motif_98SEF3MOTIFGMSEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4Upstream-111
Upstream-484