View conserved binding sites


Gene
AT1G43190
Description
polypyrimidine tract-binding protein 3
Alias
Q6ICX4;PTB3
Binding siteNameDescriptionLocationPosition
Matrix_414AGL15Not availableIntron1714
Intron887
Intron678
Intron673
Matrix_48PINot availableDownstream2775
Matrix_67GLK1Not availableUpstream-354
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNADownstream2785
Intron897
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsDownstream2796
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRDownstream2785
Downstream2783
Intron897
Intron895
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGADownstream2786
Downstream2784
Downstream2782
Downstream2780
Downstream2778
Downstream2776
Intron896
Intron894
Intron892
Intron890
Intron888
Upstream-343
Upstream-345
Upstream-347
Upstream-349